Publications
Environmental Sustainability
Ankley GT, G Daston, S Degitz, ND Denslow, R Hoke, S Kennedy, AL Miracle, E Perkins, J Snape, D Tillitt, C Tyler and D Versteeg. 2006. "Toxicogenomics in Regulatory Ecotoxicology: Potential Applications and Practical Challenges." Environmental Science & Technology 13: 4055-4065.
Daly DS, KK Anderson, EA Panisko, SO Purvine, R Fang, ME Monroe and SE Baker. 2008. "A Mixed Effects Statistical Model for Comparative LC-MS Proteomics Studies." Journal of Proteome Research, EPub Feb 6, 7(3):1209-17.
Miracle A, ND Denslow, KJ Kroll, MC Liu, KKW Wang, 2009. "Spillway-Induced Salmon Head Injury Triggers the Generation of Brain ?II-Spectrin Breakdown Product Biomarkers Similar to Mammalian Traumatic Brain Injury." Public Library of Science (PloS) ONE 4(2): e4491 (doi:10.1371/journal.pone.0004491).
Miracle AL, CW Evans, EA Ferguson, B Greenberg, P Kille, AR Schaeffner, M Sprenger, R van Aerle, and DJ Versteeg. 2007. "Applications of Genomic Technologies to Ecological Risk Assessments at Remediation / Restoration Sites." Toxicogenomics in Ecological Risk Assessments. CRC Press, Boca Raton, FL (book chapter).
Shuangshuang J, DS Daly, DL Springer, and JH Miller. 2008. "The Effects of Shared Peptides on Protein Quantification in Label-Free Proteomics by LC/MS/MS," Journal of Proteome Research 7(01):164-169.
Small JA, AL Bunn, CA McKinstry, AD Peacock, and AL Miracle. 2007. "Investigating Freshwater Periphyton Community Response to Uranium with Phospholipid Fatty Acid and Denaturing Gradient Gel Electrophoresis Analyses." Journal of Environmental Radioactivity 99(4):730-738.
Safe Nano
Dutta D, SK Sundaram, JG Teeguarden, BJ Riley, LS Fifield, JM Jacobs, SR Addleman, GA Kaysen, BM Moudgil, and TJ Weber. 2007. "Adsorbed Proteins Influence the Biological Activity and Molecular Targeting of Nanomaterials." Toxicological Sciences 100(1):303-315.
Hu J, DN Rommereim, KR Minard, A Woodstock, BJ Harrer, RA Wind, RP Phipps, and PJ Sime. 2007. "Metabolomics in Lung Inflammation: A High Resolution 1H NMR Study of Mice Exposed to Silica Dust." Journal of Toxicology Mechanisms and Methods 18:1-14.
National Research Council - Committee on Toxicology (JG Teeguarden committee member). 2008. "Review of the Federal Strategy to Address Environmental, Health, and Safety Research Needs for Engineered Nanoscale Materials." National Academies Press.
Orr, G, DJ Panther, KJ Cassens, JL Phillips, BJ Tarasevich and JG Pounds. 2009. "Syndecan-1 Mediates the Coupling of Positively Charged Submicrometer Amorphous Silica Particles with Actin Filaments Across the Alveolar Epithelial Cell Membrane." Toxicology and Applied Pharmacology 236 (2).
Orr G, DJ Panther, JL Phillips, BJ Tarasevich, A. Dohnalkova, D Hu, JG Teeguarden, JG Pounds. 2007. "Submicrometer and Nanoscale Inorganic Particles Exploit the Actin Machinery to be Propelled Along Microvilli-like Structures into Alveolar Cells." American Chemical Society (ACS) Nano 1(5): 463-475.
Sundaram, SK and TJ Weber, guest editors. 2008. The International Journal of Nanotechnology (IJNT) Special Issue on Nanotoxicology 5 (1).
Teeguarden JG, and A Gupta. 2008. "Toxicology Steps up to Nanotechnology Safety." Research & Development 50(1):28-29.
Teeguarden JG, MS Bogdanffy, TR Covington, C Tan, and AM Jarabek. 2008. "A PBPK Model for Evaluating the Impact of Aldehyde Dehydrogenase Polymorphisms on Comparative Rat and Human Nasal Tissue Acetaldehyde Dosimetry." Inhalation Toxicology 20(4): 375-390.
Teeguarden JG, PM Hinderliter, G Orr, BD Thrall, and JG Pounds. 2007. "Particokinetics In Vitro: Dosimetry Considerations for In Vitro Nanoparticle Toxicity Assessments." Toxicological Sciences 95(2): 300-312.
Varnum SM, MG Warner, BP Dockendorff, NC Anheier Jr, J Lou, JD Marks, LA Smith, MJ Feldhaus, JW Grate, and CJ Bruckner-Lea. 2006. "Enzyme-amplified Protein Microarray and Fluidic Renewable Surface Fluorescence Immunoassay for Botulinum Neurotoxin Detection Using High-affinity Recombinant Antibodies." Analytica Chimica Acta 570(2):137-143
Waters KM, JG Pounds, and BD Thrall. 2006. "Data Merging for Integrated Microarray and Proteomic Analysis." Briefings in Functional Genomics and Proteomics 5: 261-272.
Waters KM, LM Masiello, RC Zangar, BJ Tarasevich, NJ Karin, RD Quesenberry, S Bandyopadhyay, JG Teeguarden, JG Pounds, and BD Thrall. 2008. "Macrophage Responses to Silica Nanoparticles are Highly Conserved across Particle Sizes." Toxicological Sciences 104(1):155-162 (doi:10.1093/toxsci/kfn250).
Webb-Robertson BJM, LA McCue, N Beagley, JE McDermott, DS Wunschel, SM Varnum, JZ Hu, NG Isern, GW Buchko, K Mcateer, JG Pounds, SJ Skerret, and CW Frevert. 2009. " A Bayesian Integration Model of High-Throughput Proteomics and Metabolomics Data for Improved Early Detection of Microbial Infections." Pacific Symposium on Biocomputing 14:451-463.
Weber TJ, HS Smallwood, LE Kathmann, LM Markillie, TC Squier, and BD Thrall. 2006. "Functional Link between TNF Biosynthesis and CaM-dependent Activation of Inducible Nitric Oxide Synthase in RAW 264.7 Macrophages." American Journal of Physiology - Cell Physiology 290(6):C1512-C1520.
Zangar RC, N Bollinger, S Verma, NJ Karin, and Y Lu. 2008. "The Nuclear Factor- ?B Pathway Regulates Cytochrome P450 3A4 Protein Stability." Molecular Pharmacology 73:1652-1658.
Sensors
Lin Y, and G Liu. 2009. Functionalization of Nanotubes and Nanowires for Sensing Applications. Handbook of Electrochemical Nanotechnology. PNNL-SA-48739, Pacific Northwest National Laboratory, Richland, WA.
Liu G, J Wang, and Y Lin. 2007. "Nanoparticle-based Biosensors and Bioassays". Electrochemical Sensors, Biosensors and their Biomedical Applications, ed. X Zhang, H. Ju, J. Wang, Academic Press, Burlington, MA. Chapter 14: 441-457.
Liu G and Y Lin. 2006. "Carbon Nanotube Templated Assembly of Protein." Journal of Nanoscience and Nanotechnology 6(4):948-953.
Liu G, H Wu, A Dohnalkova, and Y Lin. 2007. "Apoferritin Templated Synthesis of Encoded Metallic-Phosphate Nanoparticle Tags." Analytical Chemistry 79(15): 5614-5619.
Liu G, C Timchalk, and Y Lin. 2006. "Bioelectrochemical Magnetic Immunosensing of Trichloropyridinol: A Potential Insecticide Biomarker." Electroanalysis 18(16):1605-1613.
Liu G, H Wu, J Wang, and Y Lin. 2006. "Apoferritin Templated Synthesis of Metal Phosphate Nanoparticle Labels for Electrochemical Immunoassay." Small 2(10):1139-1143.
Liu G, J Wang, DS Wunschel, and Y Lin. 2006. "Electrochemical Proteolytic Beacon for Detection of Matrix Metalloproteinase Activities." Journal of the American Chemical Society 128(38):12382-12383.
Liu G, J Wang, H Wu, and Y Lin. 2006. "Versatile Apoferritin Nanoparticle Labels for Assay of Protein." Analytical Chemistry, 78(21):7417-7423 (doi:10.1021/ac060653j).
Liu G, J Wang, H Wu, and Y Lin. 2007. "Nanovehicles based Bioassay Labels." Electroanalysis.19(7-8):777-785 (doi:10.1002/elan.200603787).
Liu G, J Wang, S Lea, and Y Lin. 2006. "Bioassay Labels Based on Apoferritin Nanovehicles." Chembiochem 7(9):1315-1319 (doi:10.1002/cbic.200600225).
Wang J, G Liu, and Y Lin. 2007. "Nanotubes, Nanowires, and Nanocantilevers in Biosensor Development". Chapter 3 in Nanomaterials for Biosensors, Nanotechnologies for Life Sciences, vol. 8: 56-100. ed. Challa S.S.R. Kumar, Wiley-VCH, Weinheim, Germany.
Wu H, G Liu, J Wang, and Y Lin. 2007. "Quantum-Dots Based Electrochemical Immunoassay of Interleukin-1a." Electrochemistry Communications 9(7):1573-1577 (doi:10.1016/j.elecom.2007.02.024).
Response to Biological Agents
Hu J, RA Wind, and DN Rommereim. 2006. "H-1 Relaxation Times of Metabolites in Biological Samples Obtained with Nondestructive Ex-vivo Slow-MAS NMR." Magnetic Resonance in Chemistry 44(3):269-275 (doi:10.1002/mrc.1764).
Preti G, AR Willse, JN Labows, JJ Leyden, JH Wahl, and J Kwak. 2006. "Letter to the Editor: On the Definition and Measurement of Human Scent: Comments on Curran et al." Journal of Chemical Ecology 32(8):1613-1616.
Straub TM, K Höner zu Bentrup, PO Coghlan, A Dohnalkova, BK Mayer, RA Bartholomew, CO Valdez, CJ Bruckner-Lea, CP Gerba, MA Abbaszadegan, CA Nickerson. 2007. "In Vitro Cell Culture Infectivity Assay for Human Noroviruses." Emerging Infectious Diseases 13(3):396-403.
Straub TM, K Höner zu Bentrup, PO Coghlan, A Dohnalkova, BK Mayer, RA Bartholomew, CO Valdez, CJ Bruckner-Lea, CP Gerba, MA Abbaszadegan, CA Nickerson. 2007. Response to the letter to the Editor: "Cell Culture Assay for Human Noroviruses," Emerging Infectious Diseases 13(7):1117-1118.
Wind RA and JZ Hu. 2006. "In Vivo and Ex Vivo High-resolution 1H NMR in Biological Systems using Low-speed Magic Angle Spinning." Progress in Nuclear Magnetic Resonance Spectroscopy 49: 207-259.
Wind RA, J Hu, and PD Majors. 2006. "Localized In Vivo Isotropic-Anisotropic Correlation 1H NMR Spectroscopy Using Ultraslow Magic Angle Spinning." Magnetic Resonance in Medicine 55(1):41-49.
Willse AR, J Kwak, K Yamazaki, G Preti, JH Wahl, and G Beauchamp. 2006. "Individual Odortypes: Interaction of MHC and Background Genes." Immunogenetics 58(12):967-982.